Links for May 14 We are looking forward to hearing about everyone’s exercise solutions today! Please plan for about 10 minutes to talk through yours. We will let you share the screen when it’s your turn. If you would like to follow along with each post, the “Schedule” section of our website now has links to all the final versions of blog posts, so you can open those for all the currently finalized exercise posts as we get to them.
Links for May 7 Large group: meeting link
Group 1 (Sierra, Camron, Sherry, James): meeting link Group 2 (Sarah, Burton, Daniel): meeting link Group 3 (Amy, Sere, Mikaela): meeting link Vocabulary quiz for May 7 Loading…
Links for April 30 Large group: meeting link
Group 1 (Sierra, Camron, Sere): meeting link Group 2 (Burton, Mikaela, Sherry, Amy): meeting link Group 3 (Daniel, James, Sarah): meeting link Additional links More on spatial point processes:
https://crd150.github.io/lab6.html http://spatstat.org/ https://training.fws.gov/courses/references/tutorials/geospatial/CSP7304/documents/PointPatterTutorial.pdf More on EBImages:
https://www.bioconductor.org/packages/release/bioc/vignettes/EBImage/inst/doc/EBImage-introduction.html Vocabulary quiz for April 30 Loading…
Links for April 23 Large group: meeting link
Group 1 (Sierra, Sarah, Daniel, Sere): meeting link Group 2 (Mikaela, Sherry, James): meeting link Group 3 (Burton, Camron, Amy): meeting link Additional links Link for HIV amino acid sequences: https://www.hiv.lanl.gov/content/sequence/NEWALIGN/align.html Online book on ggtree: https://yulab-smu.github.io/treedata-book/ Introductory vignette for phangorn: https://cran.r-project.org/web/packages/phangorn/vignettes/Trees.pdf Vignette for ape: https://cran.r-project.org/web/packages/ape/vignettes/MoranI.pdf Online book with (much!) more on studying networks: http://networksciencebook.com/ Relevant COVID-19 article: https://www.
Links for April 16 Large group: meeting link
Group 1 (Sarah, James, Burton, Mikeala): meeting link Group 2 (Daniel, Amy, Sierra): meeting link Group 3 (Sere, Camron, Sherry): meeting link Space for comments, questions For Chapter 9: https://www.sli.do/ Event code: #MSMB_CH9 For Chapter 10 (will be live starting this weekend): https://www.sli.do/ Event code: #MSMB_CH10 Vocabulary quiz for April 16 Loading…
Links for April 9 Large group: meeting link
Group 1 (Sierra, Daniel, Burton): meeting link Group 2 (Camron, Sarah, Mikaela): meeting link Group 3 (Sere, James, Sherry, Amy): meeting link Additional links DESeq2 vignette edgeR vignette Vocabulary quiz for April 9 Loading…
General course information We are going to try meeting each week using Microsoft Teams during our usual time on Thursdays, 3-5pm. The class structure will remain the same as before, however everything will be online:
3:00-3:10 pm: Take the quiz through the online blog post. 3:10-4:00 pm: Large group meeting for group discussion. 4:00-5:00 pm: Smaller meetings for groups to work on the chapter exercise.
Links for April 2 Large group: meeting link